Pavian
Pavian is a tool designed to analyze report files from a variety of classification modules, namely, for Basestack, Mytax uses Kraken2
Note
This module contains a UI to be displayed from the rendering button in the variables table
Parameters
- report fileFile
Report file from Kraken2 run. See here. To be input INSIDE the running visualization. See images below
Returns
- Pavian VisualizationUser interface
The tool simply requires you to input your kraken.report (from mytax or otherwise) into the home-page.
Select Sample
in the left-hand navigation drawer to view diagrams and information of your report