Minimap2

Minimap2

Minimap2 performs alignment for genomic and spliced nucleotide files

Parameters

  • FASTQ/A file: file

    Raw Reads file to run alignment against a reference on.

  • Reference FASTA: File

    Your original reference FASTA file during alignment. Must also be linked to the GFF3 described above

Returns

  1. BAM: file

  2. SAM: file

_images/minimap2.png _images/minimap22.png